diff --git a/TestON/tests/SingleInstanceHATestRestart/SingleInstanceHATestRestart.py b/TestON/tests/SingleInstanceHATestRestart/SingleInstanceHATestRestart.py
new file mode 100644
index 0000000..f39eb12
--- /dev/null
+++ b/TestON/tests/SingleInstanceHATestRestart/SingleInstanceHATestRestart.py
@@ -0,0 +1,799 @@
+'''
+Description: This test is to determine if a single
+    instance ONOS 'cluster' can handle a restart
+
+List of test cases:
+CASE1: Compile ONOS and push it to the test machines
+CASE2: Assign mastership to controllers
+CASE3: Assign intents
+CASE4: Ping across added host intents
+CASE5: Reading state of ONOS
+CASE6: The Failure case. Since this is the Sanity test, we do nothing.
+CASE7: Check state after control plane failure
+CASE8: Compare topo
+CASE9: Link s3-s28 down
+CASE10: Link s3-s28 up
+CASE11: Switch down
+CASE12: Switch up
+CASE13: Clean up
+'''
+class SingleInstanceHATestRestart:
+
+    def __init__(self) :
+        self.default = ''
+
+    def CASE1(self,main) :
+        '''
+        CASE1 is to compile ONOS and push it to the test machines
+
+        Startup sequence:
+        git pull
+        mvn clean install
+        onos-package
+        cell <name>
+        onos-verify-cell
+        NOTE: temporary - onos-remove-raft-logs
+        onos-install -f
+        onos-wait-for-start
+        '''
+        import time
+        main.log.report("ONOS Single node cluster restart HA test - initialization")
+        main.case("Setting up test environment")
+
+        # load some vairables from the params file
+        PULL_CODE = False
+        if main.params['Git'] == 'True':
+            PULL_CODE = True
+        cell_name = main.params['ENV']['cellName']
+
+        #set global variables
+        global ONOS1_ip
+        global ONOS1_port
+        global ONOS2_ip
+        global ONOS2_port
+        global ONOS3_ip
+        global ONOS3_port
+        global ONOS4_ip
+        global ONOS4_port
+        global ONOS5_ip
+        global ONOS5_port
+        global ONOS6_ip
+        global ONOS6_port
+        global ONOS7_ip
+        global ONOS7_port
+
+        ONOS1_ip = main.params['CTRL']['ip1']
+        ONOS1_port = main.params['CTRL']['port1']
+        ONOS2_ip = main.params['CTRL']['ip2']
+        ONOS2_port = main.params['CTRL']['port2']
+        ONOS3_ip = main.params['CTRL']['ip3']
+        ONOS3_port = main.params['CTRL']['port3']
+        ONOS4_ip = main.params['CTRL']['ip4']
+        ONOS4_port = main.params['CTRL']['port4']
+        ONOS5_ip = main.params['CTRL']['ip5']
+        ONOS5_port = main.params['CTRL']['port5']
+        ONOS6_ip = main.params['CTRL']['ip6']
+        ONOS6_port = main.params['CTRL']['port6']
+        ONOS7_ip = main.params['CTRL']['ip7']
+        ONOS7_port = main.params['CTRL']['port7']
+
+
+        main.step("Applying cell variable to environment")
+        cell_result = main.ONOSbench.set_cell(cell_name)
+        verify_result = main.ONOSbench.verify_cell()
+
+        #FIXME:this is short term fix
+        main.log.report("Removing raft logs")
+        main.ONOSbench.onos_remove_raft_logs()
+        main.log.report("Uninstalling ONOS")
+        main.ONOSbench.onos_uninstall(ONOS1_ip)
+        main.ONOSbench.onos_uninstall(ONOS2_ip)
+        main.ONOSbench.onos_uninstall(ONOS3_ip)
+        main.ONOSbench.onos_uninstall(ONOS4_ip)
+        main.ONOSbench.onos_uninstall(ONOS5_ip)
+        main.ONOSbench.onos_uninstall(ONOS6_ip)
+        main.ONOSbench.onos_uninstall(ONOS7_ip)
+
+        clean_install_result = main.TRUE
+        git_pull_result = main.TRUE
+
+        main.step("Compiling the latest version of ONOS")
+        if PULL_CODE:
+            main.step("Git checkout and pull master")
+            main.ONOSbench.git_checkout("master")
+            git_pull_result = main.ONOSbench.git_pull()
+
+            main.step("Using mvn clean & install")
+            clean_install_result = main.TRUE
+            if git_pull_result == main.TRUE:
+                clean_install_result = main.ONOSbench.clean_install()
+            else:
+                main.log.warn("Did not pull new code so skipping mvn "+ \
+                        "clean install")
+        main.ONOSbench.get_version(report=True)
+
+        main.step("Creating ONOS package")
+        package_result = main.ONOSbench.onos_package()
+
+        main.step("Installing ONOS package")
+        onos1_install_result = main.ONOSbench.onos_install(options="-f",
+                node=ONOS1_ip)
+
+
+        main.step("Checking if ONOS is up yet")
+        #TODO: Refactor
+        # check bundle:list?
+        #this should be enough for ONOS to start
+        time.sleep(60)
+        onos1_isup = main.ONOSbench.isup(ONOS1_ip)
+        if not onos1_isup:
+            main.log.report("ONOS1 didn't start!")
+        # TODO: if it becomes an issue, we can retry this step  a few times
+
+
+        cli_result1 = main.ONOScli1.start_onos_cli(ONOS1_ip)
+
+        main.step("Start Packet Capture MN")
+        main.Mininet2.start_tcpdump(
+                str(main.params['MNtcpdump']['folder'])+str(main.TEST)+"-MN.pcap",
+                intf = main.params['MNtcpdump']['intf'],
+                port = main.params['MNtcpdump']['port'])
+
+
+        case1_result = (clean_install_result and package_result and
+                cell_result and verify_result and onos1_install_result and
+                onos1_isup and cli1_results)
+
+        utilities.assert_equals(expect=main.TRUE, actual=case1_result,
+                onpass="Test startup successful",
+                onfail="Test startup NOT successful")
+
+
+        if case1_result==main.FALSE:
+            main.cleanup()
+            main.exit()
+
+    def CASE2(self,main) :
+        '''
+        Assign mastership to controllers
+        '''
+        import time
+        import json
+        import re
+
+        main.log.report("Assigning switches to controllers")
+        main.case("Assigning Controllers")
+        main.step("Assign switches to controllers")
+
+        for i in range (1,29):
+           main.Mininet1.assign_sw_controller(sw=str(i),
+                    ip1=ONOS1_ip,port1=ONOS1_port)
+
+        mastership_check = main.TRUE
+        for i in range (1,29):
+            response = main.Mininet1.get_sw_controller("s"+str(i))
+            main.log.info(repr(response))
+            if re.search("tcp:"+ONOS1_ip,response):
+                mastership_check = mastership_check and main.TRUE
+            else:
+                mastership_check = main.FALSE
+        if mastership_check == main.TRUE:
+            main.log.report("Switch mastership assigned correctly")
+        utilities.assert_equals(expect = main.TRUE,actual=mastership_check,
+                onpass="Switch mastership assigned correctly",
+                onfail="Switches not assigned correctly to controllers")
+
+        #TODO: If assign roles is working reliably then manually 
+        #   assign mastership to the controller we want
+
+
+    def CASE3(self,main) :
+        """
+        Assign intents
+
+        """
+        import time
+        import json
+        import re
+        main.log.report("Adding host intents")
+        main.case("Adding host Intents")
+
+        main.step("Discovering  Hosts( Via pingall for now)")
+        #FIXME: Once we have a host discovery mechanism, use that instead
+
+        #REACTIVE FWD test
+        ping_result = main.FALSE
+        time1 = time.time()
+        ping_result = main.Mininet1.pingall()
+        time2 = time.time()
+        main.log.info("Time for pingall: %2f seconds" % (time2 - time1))
+
+        #uninstall onos-app-fwd
+        main.log.info("Uninstall reactive forwarding app")
+        main.ONOScli1.feature_uninstall("onos-app-fwd")
+
+        main.step("Add  host intents")
+        #TODO:  move the host numbers to params
+        import json
+        intents_json= json.loads(main.ONOScli1.hosts())
+        intent_add_result = main.FALSE
+        for i in range(8,18):
+            main.log.info("Adding host intent between h"+str(i)+" and h"+str(i+10))
+            host1 =  "00:00:00:00:00:" + str(hex(i)[2:]).zfill(2).upper()
+            host2 =  "00:00:00:00:00:" + str(hex(i+10)[2:]).zfill(2).upper()
+            #NOTE: get host can return None
+            #TODO: handle this
+            host1_id = main.ONOScli1.get_host(host1)['id']
+            host2_id = main.ONOScli1.get_host(host2)['id']
+            tmp_result = main.ONOScli1.add_host_intent(host1_id, host2_id )
+            intent_add_result = intent_add_result and tmp_result
+        #TODO Check if intents all exist in datastore
+        #NOTE: Do we need to print this once the test is working?
+        #main.log.info(json.dumps(json.loads(main.ONOScli1.intents(json_format=True)),
+        #    sort_keys=True, indent=4, separators=(',', ': ') ) )
+
+    def CASE4(self,main) :
+        """
+        Ping across added host intents
+        """
+        description = " Ping across added host intents"
+        main.log.report(description)
+        main.case(description)
+        Ping_Result = main.TRUE
+        for i in range(8,18):
+            ping = main.Mininet1.pingHost(src="h"+str(i),target="h"+str(i+10))
+            Ping_Result = Ping_Result and ping
+            if ping==main.FALSE:
+                main.log.warn("Ping failed between h"+str(i)+" and h" + str(i+10))
+            elif ping==main.TRUE:
+                main.log.info("Ping test passed!")
+                Ping_Result = main.TRUE
+        if Ping_Result==main.FALSE:
+            main.log.report("Intents have not been installed correctly, pings failed.")
+        if Ping_Result==main.TRUE:
+            main.log.report("Intents have been installed correctly and verified by pings")
+        utilities.assert_equals(expect = main.TRUE,actual=Ping_Result,
+                onpass="Intents have been installed correctly and pings work",
+                onfail ="Intents have not been installed correctly, pings failed." )
+
+    def CASE5(self,main) :
+        '''
+        Reading state of ONOS
+        '''
+        import time
+        import json
+        from subprocess import Popen, PIPE
+        from sts.topology.teston_topology import TestONTopology # assumes that sts is already in you PYTHONPATH
+
+        main.log.report("Setting up and gathering data for current state")
+        main.case("Setting up and gathering data for current state")
+        #The general idea for this test case is to pull the state of (intents,flows, topology,...) from each ONOS node
+        #We can then compare them with eachother and also with past states
+
+        main.step("Get the Mastership of each switch from each controller")
+        global mastership_state
+        ONOS1_mastership = main.ONOScli1.roles()
+        #print json.dumps(json.loads(ONOS1_mastership), sort_keys=True, indent=4, separators=(',', ': '))
+        #TODO: Make this a meaningful check
+        if "Error" in ONOS1_mastership or not ONOS1_mastership:
+            main.log.report("Error in getting ONOS roles")
+            main.log.warn("ONOS1 mastership response: " + repr(ONOS1_mastership))
+            consistent_mastership = main.FALSE
+        else:
+            mastership_state = ONOS1_mastership
+            consistent_mastership = main.TRUE
+            main.log.report("Switch roles are consistent across all ONOS nodes")
+        utilities.assert_equals(expect = main.TRUE,actual=consistent_mastership,
+                onpass="Switch roles are consistent across all ONOS nodes",
+                onfail="ONOS nodes have different views of switch roles")
+
+
+        main.step("Get the intents from each controller")
+        global intent_state
+        ONOS1_intents = main.ONOScli1.intents( json_format=True )
+        intent_check = main.FALSE
+        if "Error" in ONOS1_intents or not ONOS1_intents:
+            main.log.report("Error in getting ONOS intents")
+            main.log.warn("ONOS1 intents response: " + repr(ONOS1_intents))
+        else:
+            intent_check = main.TRUE
+            main.log.report("Intents are consistent across all ONOS nodes")
+        utilities.assert_equals(expect = main.TRUE,actual=intent_check,
+                onpass="Intents are consistent across all ONOS nodes",
+                onfail="ONOS nodes have different views of intents")
+
+
+        main.step("Get the flows from each controller")
+        global flow_state
+        ONOS1_flows = main.ONOScli1.flows( json_format=True )
+        flow_check = main.FALSE
+        if "Error" in ONOS1_flows or not ONOS1_flows:
+            main.log.report("Error in getting ONOS intents")
+            main.log.warn("ONOS1 flows repsponse: "+ ONOS1_flows)
+        else:
+            #TODO: Do a better check, maybe compare flows on switches?
+            flow_state = ONOS1_flows
+            flow_check = main.TRUE
+            main.log.report("Flow count is consistent across all ONOS nodes")
+        utilities.assert_equals(expect = main.TRUE,actual=flow_check,
+                onpass="The flow count is consistent across all ONOS nodes",
+                onfail="ONOS nodes have different flow counts")
+
+
+        main.step("Get the OF Table entries")
+        global flows
+        flows=[]
+        for i in range(1,29):
+            flows.append(main.Mininet2.get_flowTable("s"+str(i),1.0))
+
+        #TODO: Compare switch flow tables with ONOS flow tables
+
+        main.step("Start continuous pings")
+        main.Mininet2.pingLong(src=main.params['PING']['source1'],
+                            target=main.params['PING']['target1'],pingTime=500)
+        main.Mininet2.pingLong(src=main.params['PING']['source2'],
+                            target=main.params['PING']['target2'],pingTime=500)
+        main.Mininet2.pingLong(src=main.params['PING']['source3'],
+                            target=main.params['PING']['target3'],pingTime=500)
+        main.Mininet2.pingLong(src=main.params['PING']['source4'],
+                            target=main.params['PING']['target4'],pingTime=500)
+        main.Mininet2.pingLong(src=main.params['PING']['source5'],
+                            target=main.params['PING']['target5'],pingTime=500)
+        main.Mininet2.pingLong(src=main.params['PING']['source6'],
+                            target=main.params['PING']['target6'],pingTime=500)
+        main.Mininet2.pingLong(src=main.params['PING']['source7'],
+                            target=main.params['PING']['target7'],pingTime=500)
+        main.Mininet2.pingLong(src=main.params['PING']['source8'],
+                            target=main.params['PING']['target8'],pingTime=500)
+        main.Mininet2.pingLong(src=main.params['PING']['source9'],
+                            target=main.params['PING']['target9'],pingTime=500)
+        main.Mininet2.pingLong(src=main.params['PING']['source10'],
+                            target=main.params['PING']['target10'],pingTime=500)
+
+        main.step("Create TestONTopology object")
+        ctrls = []
+        count = 1
+        temp = ()
+        temp = temp + (getattr(main,('ONOS' + str(count))),)
+        temp = temp + ("ONOS"+str(count),)
+        temp = temp + (main.params['CTRL']['ip'+str(count)],)
+        temp = temp + (eval(main.params['CTRL']['port'+str(count)]),)
+        ctrls.append(temp)
+        MNTopo = TestONTopology(main.Mininet1, ctrls) # can also add Intent API info for intent operations
+
+        main.step("Collecting topology information from ONOS")
+        devices = []
+        devices.append( main.ONOScli1.devices() )
+        '''
+        hosts = []
+        hosts.append( main.ONOScli1.hosts() )
+        '''
+        ports = []
+        ports.append( main.ONOScli1.ports() )
+        links = []
+        links.append( main.ONOScli1.links() )
+
+
+        main.step("Comparing ONOS topology to MN")
+        devices_results = main.TRUE
+        ports_results = main.TRUE
+        links_results = main.TRUE
+        for controller in range(1): #TODO parameterize the number of controllers
+            if devices[controller] or not "Error" in devices[controller]:
+                current_devices_result =  main.Mininet1.compare_switches(MNTopo, json.loads(devices[controller]))
+            else:
+                current_devices_result = main.FALSE
+            utilities.assert_equals(expect=main.TRUE, actual=current_devices_result,
+                    onpass="ONOS"+str(int(controller+1))+" Switches view is correct",
+                    onfail="ONOS"+str(int(controller+1))+" Switches view is incorrect")
+
+            if ports[controller] or not "Error" in ports[controller]:
+                current_ports_result =  main.Mininet1.compare_ports(MNTopo, json.loads(ports[controller]))
+            else:
+                current_ports_result = main.FALSE
+            utilities.assert_equals(expect=main.TRUE, actual=current_ports_result,
+                    onpass="ONOS"+str(int(controller+1))+" ports view is correct",
+                    onfail="ONOS"+str(int(controller+1))+" ports view is incorrect")
+
+            if links[controller] or not "Error" in links[controller]:
+                current_links_result =  main.Mininet1.compare_links(MNTopo, json.loads(links[controller]))
+            else:
+                current_links_result = main.FALSE
+            utilities.assert_equals(expect=main.TRUE, actual=current_links_result,
+                    onpass="ONOS"+str(int(controller+1))+" links view is correct",
+                    onfail="ONOS"+str(int(controller+1))+" links view is incorrect")
+
+            devices_results = devices_results and current_devices_result
+            ports_results = ports_results and current_ports_result
+            links_results = links_results and current_links_result
+
+        topo_result = devices_results and ports_results and links_results
+        utilities.assert_equals(expect=main.TRUE, actual=topo_result,
+                onpass="Topology Check Test successful",
+                onfail="Topology Check Test NOT successful")
+
+        final_assert = main.TRUE
+        final_assert = final_assert and topo_result and flow_check \
+                and intent_check and consistent_mastership
+        utilities.assert_equals(expect=main.TRUE, actual=final_assert,
+                onpass="State check successful",
+                onfail="State check NOT successful")
+
+
+    def CASE6(self,main) :
+        '''
+        The Failure case. Since this is the Sanity test, we do nothing.
+        '''
+
+        main.log.report("Restart ONOS node")
+        main.log.case("Restart ONOS node")
+        main.ONOSbench.onos_kill(ONOS1_ip)
+
+        main.step("Checking if ONOS is up yet")
+        onos1_isup = main.ONOSbench.isup(ONOS1_ip)
+        # TODO: if it becomes an issue, we can retry this step  a few times
+
+
+        cli_result1 = main.ONOScli1.start_onos_cli(ONOS1_ip)
+
+        case_results = main.TRUE and onosi1_isup and cli_result1
+        utilities.assert_equals(expect=main.TRUE, actual=case_results,
+                onpass="ONOS restart successful",
+                onfail="ONOS restart NOT successful")
+
+    def CASE7(self,main) :
+        '''
+        Check state after ONOS failure
+        '''
+        import os
+        import json
+        main.case("Running ONOS Constant State Tests")
+
+        main.step("Check if switch roles are consistent across all nodes")
+        ONOS1_mastership = main.ONOScli1.roles()
+        #print json.dumps(json.loads(ONOS1_mastership), sort_keys=True, indent=4, separators=(',', ': '))
+        if "Error" in ONOS1_mastership or not ONOS1_mastership:
+            main.log.error("Error in getting ONOS mastership")
+            main.log.warn("ONOS1 mastership response: " + repr(ONOS1_mastership))
+            consistent_mastership = main.FALSE
+        else:
+            consistent_mastership = main.TRUE
+            main.log.report("Switch roles are consistent across all ONOS nodes")
+        utilities.assert_equals(expect = main.TRUE,actual=consistent_mastership,
+                onpass="Switch roles are consistent across all ONOS nodes",
+                onfail="ONOS nodes have different views of switch roles")
+
+
+        description2 = "Compare switch roles from before failure"
+        main.step(description2)
+
+        current_json = json.loads(ONOS1_mastership)
+        old_json = json.loads(mastership_state)
+        mastership_check = main.TRUE
+        for i in range(1,29):
+            switchDPID = str(main.Mininet1.getSwitchDPID(switch="s"+str(i)))
+
+            current = [switch['master'] for switch in current_json if switchDPID in switch['id']]
+            old = [switch['master'] for switch in old_json if switchDPID in switch['id']]
+            if current == old:
+                mastership_check = mastership_check and main.TRUE
+            else:
+                main.log.warn("Mastership of switch %s changed" % switchDPID)
+                mastership_check = main.FALSE
+        if mastership_check == main.TRUE:
+            main.log.report("Mastership of Switches was not changed")
+        utilities.assert_equals(expect=main.TRUE,actual=mastership_check,
+                onpass="Mastership of Switches was not changed",
+                onfail="Mastership of some switches changed")
+        mastership_check = mastership_check and consistent_mastership
+
+
+
+        main.step("Get the intents and compare across all nodes")
+        ONOS1_intents = main.ONOScli1.intents( json_format=True )
+        intent_check = main.FALSE
+        if "Error" in ONOS1_intents or not ONOS1_intents:
+            main.log.report("Error in getting ONOS intents")
+            main.log.warn("ONOS1 intents response: " + repr(ONOS1_intents))
+        else:
+            intent_state = ONOS1_intents
+            intent_check = main.TRUE
+            main.log.report("Intents are consistent across all ONOS nodes")
+        utilities.assert_equals(expect = main.TRUE,actual=intent_check,
+                onpass="Intents are consistent across all ONOS nodes",
+                onfail="ONOS nodes have different views of intents")
+
+        main.step("Compare current intents with intents before the failure")
+        if intent_state == ONOS1_intents:
+            same_intents = main.TRUE
+            main.log.report("Intents are consistent with before failure")
+        #TODO: possibly the states have changed? we may need to figure out what the aceptable states are
+        else:
+            same_intents = main.FALSE
+        utilities.assert_equals(expect = main.TRUE,actual=same_intents,
+                onpass="Intents are consistent with before failure",
+                onfail="The Intents changed during failure")
+        intent_check = intent_check and same_intents
+
+
+
+        main.step("Get the OF Table entries and compare to before component failure")
+        Flow_Tables = main.TRUE
+        flows2=[]
+        for i in range(28):
+            main.log.info("Checking flow table on s" + str(i+1))
+            tmp_flows = main.Mininet2.get_flowTable("s"+str(i+1),1.0)
+            flows2.append(tmp_flows)
+            Flow_Tables = Flow_Tables and main.Mininet2.flow_comp(flow1=flows[i],flow2=tmp_flows)
+            if Flow_Tables == main.FALSE:
+                main.log.info("Differences in flow table for switch: "+str(i+1))
+                break
+        if Flow_Tables == main.TRUE:
+            main.log.report("No changes were found in the flow tables")
+        utilities.assert_equals(expect=main.TRUE,actual=Flow_Tables,
+                onpass="No changes were found in the flow tables",
+                onfail="Changes were found in the flow tables")
+
+        main.step("Check the continuous pings to ensure that no packets were dropped during component failure")
+        #FIXME: This check is always failing. Investigate cause
+        #NOTE:  this may be something to do with file permsissions
+        #       or slight change in format
+        main.Mininet2.pingKill(main.params['TESTONUSER'], main.params['TESTONIP'])
+        Loss_In_Pings = main.FALSE 
+        #NOTE: checkForLoss returns main.FALSE with 0% packet loss
+        for i in range(8,18):
+            main.log.info("Checking for a loss in pings along flow from s" + str(i))
+            Loss_In_Pings = Loss_In_Pings or main.Mininet2.checkForLoss("/tmp/ping.h"+str(i))
+        if Loss_In_Pings == main.TRUE:
+            main.log.info("Loss in ping detected")
+        elif Loss_In_Pings == main.ERROR:
+            main.log.info("There are multiple mininet process running")
+        elif Loss_In_Pings == main.FALSE:
+            main.log.info("No Loss in the pings")
+            main.log.report("No loss of dataplane connectivity")
+        utilities.assert_equals(expect=main.FALSE,actual=Loss_In_Pings,
+                onpass="No Loss of connectivity",
+                onfail="Loss of dataplane connectivity detected")
+
+
+        #TODO:add topology to this or leave as a seperate case?
+        result = mastership_check and intent_check and Flow_Tables and (not Loss_In_Pings)
+        result = int(result)
+        if result == main.TRUE:
+            main.log.report("Constant State Tests Passed")
+        utilities.assert_equals(expect=main.TRUE,actual=result,
+                onpass="Constant State Tests Passed",
+                onfail="Constant state tests failed")
+
+    def CASE8 (self,main):
+        '''
+        Compare topo
+        '''
+        import sys
+        sys.path.append("/home/admin/sts") # Trying to remove some dependancies, #FIXME add this path to params
+        from sts.topology.teston_topology import TestONTopology # assumes that sts is already in you PYTHONPATH
+        import json
+        import time
+
+        description ="Compare ONOS Topology view to Mininet topology"
+        main.case(description)
+        main.log.report(description)
+        main.step("Create TestONTopology object")
+        ctrls = []
+        count = 1
+        temp = ()
+        temp = temp + (getattr(main,('ONOS' + str(count))),)
+        temp = temp + ("ONOS"+str(count),)
+        temp = temp + (main.params['CTRL']['ip'+str(count)],)
+        temp = temp + (eval(main.params['CTRL']['port'+str(count)]),)
+        ctrls.append(temp)
+        MNTopo = TestONTopology(main.Mininet1, ctrls) # can also add Intent API info for intent operations
+
+        main.step("Collecting topology information from ONOS")
+        devices = []
+        devices.append( main.ONOScli1.devices() )
+        '''
+        hosts = []
+        hosts.append( main.ONOScli1.hosts() )
+        '''
+        ports = []
+        ports.append( main.ONOScli1.ports() )
+        links = []
+        links.append( main.ONOScli1.links() )
+
+        main.step("Comparing ONOS topology to MN")
+        devices_results = main.TRUE
+        ports_results = main.TRUE
+        links_results = main.TRUE
+        topo_result = main.FALSE
+        start_time = time.time()
+        elapsed = 0
+        while topo_result == main.FALSE and elapsed < 120:
+            try:
+                for controller in range(1): #TODO parameterize the number of controllers
+                    if devices[controller] or not "Error" in devices[controller]:
+                        current_devices_result =  main.Mininet1.compare_switches(MNTopo, json.loads(devices[controller]))
+                    else:
+                        current_devices_result = main.FALSE
+                    utilities.assert_equals(expect=main.TRUE, actual=current_devices_result,
+                            onpass="ONOS"+str(int(controller+1))+" Switches view is correct",
+                            onfail="ONOS"+str(int(controller+1))+" Switches view is incorrect")
+
+                    if ports[controller] or not "Error" in ports[controller]:
+                        current_ports_result =  main.Mininet1.compare_ports(MNTopo, json.loads(ports[controller]))
+                    else:
+                        current_ports_result = main.FALSE
+                    utilities.assert_equals(expect=main.TRUE, actual=current_ports_result,
+                            onpass="ONOS"+str(int(controller+1))+" ports view is correct",
+                            onfail="ONOS"+str(int(controller+1))+" ports view is incorrect")
+
+                    if links[controller] or not "Error" in links[controller]:
+                        current_links_result =  main.Mininet1.compare_links(MNTopo, json.loads(links[controller]))
+                    else:
+                        current_links_result = main.FALSE
+                    utilities.assert_equals(expect=main.TRUE, actual=current_links_result,
+                            onpass="ONOS"+str(int(controller+1))+" links view is correct",
+                            onfail="ONOS"+str(int(controller+1))+" links view is incorrect")
+            except:
+                main.log.error("something went wrong in topo comparison")
+                main.log.warn( repr( devices ) )
+                main.log.warn( repr( ports ) )
+                main.log.warn( repr( links ) )
+
+            devices_results = devices_results and current_devices_result
+            ports_results = ports_results and current_ports_result
+            links_results = links_results and current_links_result
+            topo_result = devices_results and ports_results and links_results
+            elapsed = time.time()-start_time()
+        #TODO make sure this step is non-blocking. IE add a timeout
+        main.log.report("Very crass estimate for topology discovery/convergence: " + str(elapsed) + " seconds")
+        utilities.assert_equals(expect=main.TRUE, actual=topo_result,
+                onpass="Topology Check Test successful",
+                onfail="Topology Check Test NOT successful")
+        if topo_result == main.TRUE:
+            main.log.report("ONOS topology view matches Mininet topology")
+
+
+    def CASE9 (self,main):
+        '''
+        Link s3-s28 down
+        '''
+        #NOTE: You should probably run a topology check after this
+
+        link_sleep = int(main.params['timers']['LinkDiscovery'])
+
+        description = "Turn off a link to ensure that Link Discovery is working properly"
+        main.log.report(description)
+        main.case(description)
+
+
+        main.step("Kill Link between s3 and s28")
+        Link_Down = main.Mininet1.link(END1="s3",END2="s28",OPTION="down")
+        main.log.info("Waiting " + str(link_sleep) + " seconds for link down to be discovered")
+        time.sleep(link_sleep)
+        utilities.assert_equals(expect=main.TRUE,actual=Link_Down,
+                onpass="Link down succesful",
+                onfail="Failed to bring link down")
+        #TODO do some sort of check here
+
+    def CASE10 (self,main):
+        '''
+        Link s3-s28 up
+        '''
+        #NOTE: You should probably run a topology check after this
+
+        link_sleep = int(main.params['timers']['LinkDiscovery'])
+
+        description = "Restore a link to ensure that Link Discovery is working properly"
+        main.log.report(description)
+        main.case(description)
+
+        main.step("Bring link between s3 and s28 back up")
+        Link_Up = main.Mininet1.link(END1="s3",END2="s28",OPTION="up")
+        main.log.info("Waiting " + str(link_sleep) + " seconds for link up to be discovered")
+        time.sleep(link_sleep)
+        utilities.assert_equals(expect=main.TRUE,actual=Link_Up,
+                onpass="Link up succesful",
+                onfail="Failed to bring link up")
+        #TODO do some sort of check here
+
+
+    def CASE11 (self, main) :
+        '''
+        Switch Down
+        '''
+        #NOTE: You should probably run a topology check after this
+        import time
+
+        switch_sleep = int(main.params['timers']['SwitchDiscovery'])
+
+        description = "Killing a switch to ensure it is discovered correctly"
+        main.log.report(description)
+        main.case(description)
+
+        #TODO: Make this switch parameterizable
+        main.step("Kill s28 ")
+        main.log.report("Deleting s28")
+        #FIXME: use new dynamic topo functions
+        main.Mininet1.del_switch("s28")
+        main.log.info("Waiting " + str(switch_sleep) + " seconds for switch down to be discovered")
+        time.sleep(switch_sleep)
+        #Peek at the deleted switch
+        main.log.warn(main.ONOScli1.get_device(dpid="0028"))
+        #TODO do some sort of check here
+
+    def CASE12 (self, main) :
+        '''
+        Switch Up
+        '''
+        #NOTE: You should probably run a topology check after this
+        import time
+        #FIXME: use new dynamic topo functions
+        description = "Adding a switch to ensure it is discovered correctly"
+        main.log.report(description)
+        main.case(description)
+
+        main.step("Add back s28")
+        main.log.report("Adding back s28")
+        main.Mininet1.add_switch("s28", dpid = '0000000000002800')
+        #TODO: New dpid or same? Ask Thomas?
+        main.Mininet1.add_link('s28', 's3')
+        main.Mininet1.add_link('s28', 's6')
+        main.Mininet1.add_link('s28', 'h28')
+        main.Mininet1.assign_sw_controller(sw="28",
+                ip1=ONOS1_ip,port1=ONOS1_port)
+        main.log.info("Waiting " + str(switch_sleep) + " seconds for switch up to be discovered")
+        time.sleep(switch_sleep)
+        #Peek at the added switch
+        main.log.warn(main.ONOScli1.get_device(dpid="0028"))
+        #TODO do some sort of check here
+
+    def CASE13 (self, main) :
+        '''
+        Clean up
+        '''
+        import os
+        import time
+        description = "Test Cleanup"
+        main.log.report(description)
+        main.case(description)
+        main.step("Killing tcpdumps")
+        main.Mininet2.stop_tcpdump()
+
+        main.step("Copying MN pcap and ONOS log files to test station")
+        testname = main.TEST
+        #NOTE: MN Pcap file is being saved to ~/packet_captures
+        #       scp this file as MN and TestON aren't necessarily the same vm
+        #FIXME: scp
+        #####mn files
+        #TODO: Load these from params
+        #NOTE: must end in /
+        log_folder = "/opt/onos/log/"
+        log_files = ["karaf.log", "karaf.log.1"]
+        #NOTE: must end in /
+        dst_dir = "~/packet_captures/"
+        for f in log_files:
+            main.ONOSbench.secureCopy( "sdn", ONOS1_ip,log_folder+f,"rocks",\
+                    dst_dir + str(testname) + "-ONOS1-"+f )
+
+        #std*.log's
+        #NOTE: must end in /
+        log_folder = "/opt/onos/var/"
+        log_files = ["stderr.log", "stdout.log"]
+        #NOTE: must end in /
+        dst_dir = "~/packet_captures/"
+        for f in log_files:
+            main.ONOSbench.secureCopy( "sdn", ONOS1_ip,log_folder+f,"rocks",\
+                    dst_dir + str(testname) + "-ONOS1-"+f )
+
+
+        #sleep so scp can finish
+        time.sleep(10)
+        main.step("Packing and rotating pcap archives")
+        os.system("~/TestON/dependencies/rotate.sh "+ str(testname))
+
+
+        #TODO: actually check something here
+        utilities.assert_equals(expect=main.TRUE, actual=main.TRUE,
+                onpass="Test cleanup successful",
+                onfail="Test cleanup NOT successful")